ModelBrick1: Regulation of root gravitropism by auxin reduced model
Band, L. R., Wells, D. M., Larrieu, A., Sun, J., Middleton, A. M., French, A. P., & Oliva, M. (2012).
Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism.
Proceedings of the National Academy of Sciences, 109(12), 4668-4673.
This ModelBrick belongs to the reduced model of the auxin gravitropism. It takes into account 3 main reactions a) the production of the reported protein construct VENUS, b) its degradation by photobleaching and c) construct degradation by auxin action.
|Vcell: reaction diagram||SBGN visualization|
|Vcell Simulation||Publication Figure 2A|
For simulation the doses of auxin has been set at different concentration where:
|VCell curated model||CM_PM22393022_MB1.vcml||Designed with VCell|
|XML||BIOMD0000000414.xml||Exported from BioModels database|
|GraphML||CM_PM22393022_MB1.graphml||Exported from VANTED(SBGN-ED)|
|SBGN-ML||CM_PM22393022_MB1.sbgn||Exported from VANTED(SBGN-ED)|
Maria Heredia, Michael Blinov